Xenopus Database
JGI Xenopus tropicalis Genomic Sequencing. Xenopus laevis Daudin 1802 homotypic synonym.
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A controlled structured vocabulary for Xenopus anatomy and development is essential for organizing these data.
Xenopus database. A genomic epigenomic and transcriptomic model organism database Nucleic Acids Res Volume 46 Issue D1 pp. Tropicalis bioinformatic tools for comparative genetic analyses including BLAST. In addition links are provided to retrieve biological records and collection information from the Global Biodiversity Information Facility GBIF Data Portal and bioscience articles from BioOne journals.
The frogs Xenopus laevis and Xenopus Silurana tropicalis are widely used in biomedical research ranging from the study of cell and developmental biology. Amphibian Research Center through collaboration between the Xenopus Community in Japan XCIJ and National Bio-Resource. 8355 for references in articles please use NCBItxid8355 current name.
It was produced by Dr. Clones may be ordered from Source BioScience. When the database model was built over a decade ago we had very little information on the nature of the Xlaevis tetraploidization but a Chado-based data model was proposed that could deal with the various forms of data in both species.
Australia Western Australia NW Kimberley region Type locality. Gehyra xenopus COGGER 2000. Online Database Xenopus laevisi Summary.
It hosts a variety of content including current and archived genomes for both X. D861-D868 2016 Session AM Uno Y Kwon T et al Genome evolution in the allotetraploid frog Xenopus laevis Nature 5387625336-343 doi101038nature19840. Phyriadoria xenopus WELLS WELLINGTON 1989.
We participate in Xenbase the Xenopus model organism database. The intention of this chapter is to give the reader a guide to the publicly accessible databases where these data can be found and an idea of the current scope and limitations of the data in these resources. Xenbase is a model organism database that provides centralized access to this information including gene function data from high-throughput screens and the scientific literature.
Defining a large set of full length clones from a Xenopus. Near the Port Warrender road crossing of the King Edward River 14 52 S 126 12 E W. Gehyra xenopus DOUGHTY et al.
Gilchrist M Zorn A. Gene expression data for Xenopus are collected and curated in diverse forms and locations. Gehyra xenopus KLUGE 1993.
Xenbase is a comprehensive database that provides a portal to inter-related divers biological and genomic data related to Xenopus research all of which is highly integrated with other model organism databases and international resources such as NCBI. Frogs of the genus Xenopus are the only frogs with clawed toes and the African clawed frog Xenopus laevis is the largest species adults reaching 120mm. Larvae are mid-water suspension feeders having long barbels and little pigmentation.
XenOrtho DB Xenopus Ortholog DataBase is a database in which ortholog genes of Xenopus tropicalis Xenopus laevis and humans are listed. M Voigt J Smith JC Papalopulu N. An online database that provides taxonomic information common names synonyms and geographical jurisdiction of a species.
The data and methods used in constructing this database are described in. Silurana tropicalis Gray 1864. Fukui Faculty of Science and Engineering Chuo Univ and Dr.
Xenopus tropicalis Gray 1864 basionym. Xenopus laevis African clawed frog. In Xenbase we were tasked to represent genomic molecular and biological data of both a diploid and tetraploid Xenopus species.
Sanger Institute Xenopus tropicalis EST database.
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